Low Carb Keto Pumpkin Muffins Recipe (Easy & Moist!) | Wholesome Yum (2024)

Low Carb Keto Pumpkin Muffins Recipe (Easy & Moist!) | Wholesome Yum (1)

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Table Of Contents hide

  • Why You’ll Love This Low Carb Keto Pumpkin Muffins Recipe
  • Almond Flour Pumpkin Muffins Ingredients
  • How To Make Low Carb Almond Flour Pumpkin Muffins
  • Tips For The Best Low Carb Pumpkin Muffins
  • Variations
  • Storage Instructions
  • More Low Carb Pumpkin Recipes
  • Tools To Make Pumpkin Keto Muffins
  • Low Carb Keto Pumpkin Muffins Recipe

Low carb pumpkin recipes are oneof the best things about fall! Especially healthy, low carb keto pumpkin muffins. These are deceptively simple, but taste so rich and cozy — most people won’t believe they’re coconut and almond flour pumpkin muffins! They’re made with real food ingredients and no sugar whatsoever… and taste perfect with a hot cup of keto butter coffee for a satisfying breakfast.

If you love pumpkin recipes this time of year, be sure to also trypumpkin pie cupcakesandketo pumpkin roll.

Which flour is the best one to use for healthy pumpkin muffins? Naturally, as with all myketo desserts, I only considered low carb flours. I experimented on keto pumpkin muffins with almond flour, coconut flour, and flax seed meal. Almond flour alone can be too heavy, coconut flour is too dense, and flax seed meal can be a little gritty. In the end, I settled on a combination of almond flour and coconut flour.

Making the low carb pumpkin muffins with coconut flour and almond flour helps create the best texture, better than one or the other alone. The coconut flour also helps keep them lighter.Low carb coconut flour recipestend to be less heavy than almond flour ones.

In particular, I use a blend of Wholesome Yum Almond Flour, Coconut Flour, and Besti Monk Fruit Allulose Blend for the batter — the allulose keeps them super soft and moist, while the mix of flours keeps them cake-like. They make the ultimate pumpkin keto muffins that anyone can enjoy, whether or not they’re keeping track of carbs.

Why You’ll Love This Low Carb Keto Pumpkin Muffins Recipe

  • Rich pumpkin spice flavors
  • Moist, cakey texture
  • Uses basic keto baking ingredients
  • Just 10 minutes prep time
  • About 4 grams net carbs per muffin
Low Carb Keto Pumpkin Muffins Recipe (Easy & Moist!) | Wholesome Yum (3)

Almond Flour Pumpkin Muffins Ingredients

This section explains how to choose the best ingredients for keto pumpkin spice muffins, what each one does in the recipe, and substitution options. For measurements, see the recipe card below.

  • Wholesome Yum Almond Flour – This flour creates naturally gluten free pumpkin muffins, and it’s finely milled for a more authentic texture.
  • Wholesome Yum Coconut Flour – This flour is made from one ingredient (pure organic coconuts!) and helps absorb the extra moisture from the pumpkin. Don’t skip it!
  • Besti Monk Fruit Allulose Blend – This sweetener helps the muffins bake up soft, all with 0g net carbs. You may be able to substitute erythritol or another sugar replacement here (use the sweetener conversion chart), but the taste and texture will be different.
  • Baking Powder
  • Pumpkin Pie Spice – This is a blend of spices, including ground cinnamon, ginger, nutmeg, cloves, and allspice. You can get it pre-mixed or make homemade pumpkin pie spice instead.
  • Sea Salt
  • Eggs – Use whole, large eggs.
  • Pumpkin Puree – You can make your own or get it canned. Avoid getting canned pumpkin pie filling, which contains added sugar.
  • Almond Milk – Either plain or vanilla is fine, but make sure it’s unsweetened. You can order it online, get it at the grocery store, or make homemade almond milk. Other types of keto friendly milk would also work fine here.
  • Ghee – Ghee makes these paleo pumpkin muffins, but you can also use butter or coconut oil instead. I admit I usually use butter when I make these.
  • Vanilla Extract
  • Pumpkin Seeds – These are pepitas, the hull-less seeds from specific varieties of pumpkins. Avoid seeds with the hull, which can be tough to chew in this recipe. You could easily swap these with walnuts, pecans, or sugar free chocolate chips, or top with a layer of cream cheese frosting after baking.

See the variations section below if you want to make these nut-free, dairy-free, paleo, or with cream cheese filling.

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How To Make Low Carb Almond Flour Pumpkin Muffins

This section shows how to make keto friendly pumpkin muffins with step-by-step photos and details about the technique, to help you visualize it. For full instructions, including amounts and temperatures, see the recipe card below.

  • Mix dry ingredients. In a large mixing bowl, combine flours, sweetener, baking powder, pumpkin pie spice, and sea salt. Whisk well to ensure no clumps.
Low Carb Keto Pumpkin Muffins Recipe (Easy & Moist!) | Wholesome Yum (5)
  • Add wet ingredients. Add eggs, pumpkin puree, almond milk (or keto milk of choice), ghee (or fat of choice), and vanilla. Mix until completely incorporated. (It will be thicker than a traditional muffin batter — this is normal.)
Low Carb Keto Pumpkin Muffins Recipe (Easy & Moist!) | Wholesome Yum (6)
  • Scoop. Spoon the batter into a muffin tin lined with paper liners. Smooth the tops and sprinkle with pepitas.
Low Carb Keto Pumpkin Muffins Recipe (Easy & Moist!) | Wholesome Yum (7)
  • Bake. Bake in a 350 degree F oven until golden and an inserted toothpick comes out clean.
Low Carb Keto Pumpkin Muffins Recipe (Easy & Moist!) | Wholesome Yum (8)

Tips For The Best Low Carb Pumpkin Muffins

Making keto pumpkin muffins with almond flour and coconut flour looks a little different than using traditional white flour, so keep these tips in mind.

  • Choose the right fat. Go with ghee, butter, or solid coconut oil (melted). Avoid fats that are liquid at room temperature (i.e. olive or avocado oil), since the muffins will take on a different texture.
  • Expect a thick batter. These keto pumpkin muffins need a thicker batter than most muffin recipes, even low carb muffin recipes. (For example,low carb keto blueberry muffinshave a thinner batter.) But, because of the way the pumpkin and coconut flour interact with each other, this one starts out thicker. Don’t worry, the muffins won’t be dry!
  • Fill muffin liners close to the top. Almond flour and coconut flour don’t rise as much as wheat flour, so the muffin liners should be pretty full. If you only fill them 1/2 or 3/4 of the way, you won’t get much of the best part – the muffin tops!
  • Ensure doneness. An inserted toothpick should come out clean. Underbaking the muffins can cause them to fall (deflate) or be too wet inside. If muffins are browning too quickly, you can tent the pan with foil until they’re done.
  • Cool if possible. This is not required, but cooling improves the inner texture. I do usually reheat them in the microwave or the oven when ready to eat. Adding a pat of butter to a warm muffin is just perfect!
Low Carb Keto Pumpkin Muffins Recipe (Easy & Moist!) | Wholesome Yum (9)

Variations

One of my favorite things about this low carb pumpkin muffin recipe is that it’s easy to customize to make additions or fit any dietary restrictions. Below are the most common ones people ask me for.

Nut-free variation:

  • Sub the almond flour: When I first published this low carb pumpkin muffins recipe, I said that golden flaxseed meal is a great almond flour replacement if you are nut-free due to allergies, or need to send these muffins to a nut-free school with your kid. However, I have since revised my recommendation and much prefersunflower seed mealinstead. It is also nut-free, but creates a much better texture than the flaxseed meal. That being said, almond flour still makes the best keto pumpkin muffins in terms of texture and flavor.
  • Sub the almond milk: Replace it with coconut milk beverage — the liquid kind in the dairy section, not the thick kind in a can.

Dairy-free or paleo variation:

Although I make lots ofpaleo recipes, I wasn’t really planning to make paleo pumpkin muffins in this case. Fortunately, I was pleased that they turned out that way. Virtually all the ingredients are already paleo friendly!

  • For the sweetener: Allulose is a natural sweetener, but some people prefer not to use it while following a paleo lifestyle. If that’s you, no problem. You can easily use another granulated sweetener in your paleo pumpkin muffins, like coconut sugar. That would not be sugar-free, but is natural and paleo friendly.
  • For the fat: This recipe uses ghee as the fat, which is often okay for most dairy sensitivities, but coconut oil works fine if you need to be more strict. I personally am not dairy-free, so I often use butter. Both ghee and coconut oil would be paleo friendly as well.

If your version of healthy pumpkin muffins needs to be vegan, that’s not really my thing so I highly recommend thesevegan pumpkin muffinsinstead. She has a gluten-free variation, and you can swap the sugars with sugar-free sweeteners if you’d like.

Keto Pumpkin Cream Cheese Muffins:

These almond flour pumpkin muffins go perfectly with the cream cheese filling I made for my keto cinnamon cream cheese muffins recipe. Simply follow the recipe below to make the batter, then click the link for instructions on assembling with the cream cheese filling. (You’ll get a few extra muffins if you add filling, compared to the ones without filling.)

Storage Instructions

  • Store: Store this keto pumpkin spice muffin recipe in a covered container on the counter for 2-3 days, or in the refrigerator for up to one week.
  • Freeze: Store in a freezer-safe container. Thaw at room temperature before serving.
Low Carb Keto Pumpkin Muffins Recipe (Easy & Moist!) | Wholesome Yum (10)

More Low Carb Pumpkin Recipes

If you like keto coconut flour pumpkin muffins, you’ll love these other low carb ways you can use pumpkin:

  • Healthy Pumpkin Bars
  • Keto Pumpkin Bread
  • Classic Keto Pumpkin Pie
  • Frosted Keto Pumpkin Cookies

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Recipe Card

Low Carb Keto Pumpkin Muffins Recipe (Easy & Moist!) | Wholesome Yum (12)

4.85 from 188 votes☝️ Click stars to rate or click here to leave a review!

Low Carb Keto Pumpkin Muffins Recipe

Bake up low carb keto pumpkin muffins so rich and moist, you won't believe they have 4g net carbs each! And, these almond flour pumpkin muffins are ready in 35 minutes.

Prep: 10 minutes

Cook: 25 minutes

Total: 35 minutes

Author: Maya Krampf from WholesomeYum.com

Servings: 10 (adjust to scale recipe)

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Ingredients

Tap underlined ingredients to see where to get them.

Instructions

Tap on the times in the instructions below to start a kitchen timer while you cook.

  1. Preheat the oven to 350 degrees F (177 degrees C). Line 10 muffin cups with parchment liners.

  2. In a large bowl, stir together the coconut flour, almond flour, sweetener, baking powder, pumpkin pie spice, and sea salt. Make sure there are no clumps.

  3. Stir in the the eggs, pumpkin puree, almond milk, melted ghee, and vanilla, until completely incorporated.

  4. Spoon the batter evenly into the muffin cups and smooth the tops. (They should be almost full, not 2/3 or 3/4 full.) If desired, sprinkle pumpkin seeds on top and press gently.

  5. Bake for about 25 minutes, until an inserted toothpick comes out clean and the muffins are very slightly golden around the edges.

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Related Easy Recipes

  • Keto Waffles

  • Paleo Coconut Flour Tortillas

  • Almond Flour Keto Pumpkin Bread

  • Keto Pumpkin Pie (Sugar Free)

Recipe Notes

Serving size: 1 muffin

  • This recipe was updated to make more moist muffins. The original version had 1/3 cup ghee, 1/2 cup pumpkin puree, and no almond milk. The ingredient list above and photos show the updated version.
  • I originally made these low carb pumpkin muffins with erythritol sweetener, but updated the recipe to use Besti instead, because it makes them more moist and gives them a much better texture. The sweetener amount was also reduced from 2/3 cup sweetener to 1/2 cup, based on reader feedback.

Nutrition Facts

Amount per serving. Serving size in recipe notes above.

Calories193

Fat16.2g

Protein5.8g

Total Carbs7.6g

Net Carbs4g

Fiber3.6g

Sugar1.4g

Nutrition facts are provided as a courtesy. Have questions about calculations or why you got a different result? Please see our nutrition policy.

Course:Breakfast, Snack

Cuisine:American

Keywords:almond flour pumpkin muffins, keto pumpkin muffins, low carb pumpkin muffins

Calories: 193 kcal

© Copyright Maya Krampf for Wholesome Yum. Please DO NOT SCREENSHOT OR COPY/PASTE recipes to social media or websites. We’d LOVE for you to share a link with photo instead. 🙂

Almond Flour Keto Pumpkin Muffins Recipe

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FAQs

Is pumpkin ok for a low carb diet? ›

Pumpkin puree is low in carbs and a good source of fiber,” says Maggie Michalczyk, MS, RD. Plus, it's a great ingredient for keto-compliant desserts when you want something sweet and satisfying, she says. There are 7 grams of net carbs per ½ cup serving.

How many calories in a keto pumpkin muffin? ›

Nutrition Facts
Amount Per Serving
Calories204
% Daily Value*
Total Fat 10g13%
Cholesterol 69.6mg23%
6 more rows
Sep 14, 2019

How many carbs in a pumpkin muffin? ›

Pumpkin Muffin (1 miniature) contains 10g total carbs, 9.7g net carbs, 1.2g fat, 0.7g protein, and 53 calories.

How much pumpkin can I have on keto? ›

A cup of fresh pumpkin, ¾ cup of pumpkin puree, or 1-2 servings of roasted pumpkin seeds per day should be no issue at all, as long as you account for carbs from other sources and stay under your daily limit — just make sure to avoid canned pumpkin filling, which contains tons of sugar.

How many net carbs can you have a day on keto diet? ›

Q: How Many Net Carbs a Day on Keto? A: The amount of net carbs you should take on a keto diet will depend on your age, weight, gender, and physical activity. However, a general guideline for most keto diets limits daily net carb intake to 20-50 grams.

What vegetables are not keto-friendly? ›

Starchy vegetables contain more digestible carbohydrates than fiber and should be limited when you're on the ketogenic diet. These include corn, potatoes, sweet potatoes and beets. Limit high-sugar fruits too, which spike your blood sugar more quickly than berries and have more carbohydrates.

Is pumpkin carb heavy? ›

Pumpkins keep for a long time when stored in a cool place. Pumpkin isn't just a delicious thing to eat, they're also relatively low in carbs (4-12 grams per 100 grams). This makes pumpkin a great seasonal low-carb alternative to starchier sides like rice, potato and pasta.

How many carbs are in a Costco pumpkin muffin? ›

Costco Pumpkin Muffins (1 muffin) contains 43g total carbs, 42g net carbs, 17g fat, 4g protein, and 340 calories.

How many carbs in a Morning Glory muffin? ›

Nutrition Facts (per serving)
162Calories
4gFat
29gCarbs
3gProtein

Is canned pumpkin a carb? ›

Canned Pumpkin (1 cup) contains 19.8g total carbs, 12.7g net carbs, 0.7g fat, 2.7g protein, and 83 calories.

How many carbs are in a homemade muffin? ›

Homemade Plain Muffins (1 oz) contains 11.7g total carbs, 11g net carbs, 3.2g fat, 2g protein, and 84 calories.

How many carbs in a slice of homemade pumpkin bread? ›

Nutrition Information
NutrientsAmount
Sodium172 mg
Carbohydrates20 g
Dietary Fiber1 g
Total Sugars10 g
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Can you eat unlimited vegetables on keto? ›

Eating Vegetables on the Keto Diet

To eat vegetables in a keto diet, limit those that contain a lot of carbs, like potatoes, corn, and peas. 4 Instead, up your intake of non-starchy vegetables.

What fruits are keto-friendly? ›

Keto-friendly fruits include avocados, watermelon, strawberries, lemons, tomatoes, raspberries, peaches, cantaloupe, star fruit, and blackberries. If you're unsure whether the keto diet is right for you or how it may affect your health, consider speaking with a dietitian or your healthcare provider.

Is pumpkin less carbs than potato? ›

It's carbs where the difference lies. Potatoes have the most carbs at 20 grams per 100 gram serving. Sweet potato has 17-18 grams, and pumpkin has just shy of five, which is why it's so low-calorie.

Is pumpkin good for losing weight? ›

Pumpkin is low in calories and high in fiber, which may help with weight loss. Fiber can help you feel full, reduce appetite and food intake, encourage regular bowel movements, reduce blood sugar and cholesterol levels, and improve mineral absorption in the gut, all of which may benefit weight management.

Is canned pumpkin high in carbs? ›

Fat: 7 grams. Carbs: 19 grams. Fiber: 7 grams. Vitamin A: 209% of the Daily Value (DV)

What are low-carb vegetables for keto diet? ›

Plenty of low-carb vegetable options include arugula, asparagus, bell peppers, broccoli, Brussels sprouts, cauliflower, kale, mushrooms, spinach, and tomatoes. Those vegetables provide other benefits like reducing the risk of certain chronic diseases, containing antioxidants, and providing filling fiber.

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